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Crystal structure of quee from bacillus subtilis with 6-carboxypterin- 5'-deoxyadenosyl ester bound

Analyse Crystal structure of quee from bacillus subtilis with 6-carboxypterin… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
5TH5
Type
protein
Length
968 residues
Chains
4
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
O31677
Ligands
SF4, 7C5

Structure

x-ray diffraction · 1 distinct chain.

ChainMoleculeTypeResiduesSecondary structureUniProt
A, B, C, D—protein242—O31677

Ligands and binding sites

  • SF4 · Iron/sulfur cluster · ligand · 4 copies · chains A, B, C, D
  • 7C5 · 5'-O-(2-amino-4-oxo-1,4-dihydropteridine-6-carbonyl) adenosine · ligand · 4 copies · chains A, B, C, D

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 5TH5 · Crystal Structure of QueE from Bacillus subtilis with 6-carboxypterin-5'-deoxyadenosyl… · the same entry in another collection · chain B against B, TM-score 1.00
  • O31677 · AlphaFold monomer V2.0 prediction for 7-carboxy-7-deazaguanine synthase (O31677) · a predicted model of the same protein · chain A against A, TM-score 0.99

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