Research workbench

Chaetomium thermophilum cohesin loader SCC2, C-terminal fragment

Analyse Chaetomium thermophilum cohesin loader SCC2, C-terminal fragment in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 5T8V
Type: protein
Length: 1,315 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Putative uncharacterized protein
UniProt: G0S557
Pockets: 8 · best druggability 0.61

Structure

x-ray diffraction · 1 distinct chain · 72% helix, 1% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Putative uncharacterized protein	protein	1315	72% helix, 1% strand	G0S557

Ligands and binding sites

CIT · Citric acid · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

8 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	190	0.61	0.82	33	empty
2	238	0.52	0.76	34	empty
3	54	0.42	0.83	20	empty
4	97	0.40	0.77	20	empty
5	120	0.38	0.74	19	empty

Compared structures

5T8V · Chaetomium thermophilum cohesin loader SCC2, C-terminal fragment · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt G0S557
Elsewhere: RCSB PDB 5T8V · PDBe 5T8V · UniProt G0S557

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.