Research workbench
Maedi-visna virus (mvv) integrase ccd-ctd (residues 60-275)
Analyse Maedi-visna virus (mvv) integrase ccd-ctd (residues 60-275) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 5T3A
- Type
- protein
- Length
- 212 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Integrase
- UniProt
- P35956
Structure
x-ray diffraction · 1 distinct chain · 42% helix, 28% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Integrase | protein | 212 | 42% helix, 28% strand | P35956 |
Ligands and binding sites
- ACT · Acetate ion · additive · 3 copies · chains A
- MES · 2-(N-morpholino)-ethanesulfonic acid · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5T3A · Maedi-Visna virus (MVV) integrase CCD-CTD (residues 60-275) · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P35956
- Elsewhere: RCSB PDB 5T3A · PDBe 5T3A · UniProt P35956
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