Research workbench
Crystal structure of the kix domain of cbp in complex with a MLL/C-myb chimera
Analyse Crystal structure of the kix domain of cbp in complex with a MLL/C-myb chimera in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 5SVH
- Type
- protein
- Length
- 127 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Creb-binding protein; MLL/C-myb chimera
- EC
- 2.3.1.48, 2.1.1.43
- UniProt
- Q92793, Q03164, P01103
- Ligands
- CL
Structure
x-ray diffraction · 2 distinct chains · 69% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Creb-binding protein (EC 2.3.1.48) | protein | 85 | 78% helix, 0% strand | Q92793 |
| B | MLL/C-myb chimera (EC 2.1.1.43) | protein | 42 | 52% helix, 0% strand | Q03164, P01103 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Interfaces
1 interface between chains.
- A–B · 1284 Ų buried · 11 hydrogen bonds · protein-protein
Compared structures
- 5SVH · Crystal structure of the KIX domain of CBP in complex with a MLL/c-Myb chimera · the same entry in another collection · chain A against A, TM-score 1.00
- Q92793 · AlphaFold monomer V2.0 prediction for creb-binding protein (Q92793) · a predicted model of the same protein · chain A against A, TM-score 0.92
- P01103 · AlphaFold monomer V2.0 prediction for transcriptional activator myb (P01103) · a predicted model of the same protein · chain B against A, TM-score 0.48
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q92793
- Every structure of UniProt Q03164
- Every structure of UniProt P01103
- Elsewhere: RCSB PDB 5SVH · PDBe 5SVH · UniProt Q92793 · UniProt Q03164 · UniProt P01103
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