Research workbench
Ribosome assembly factor NSA1
Analyse Ribosome assembly factor NSA1 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 5SUM
- Type
- protein
- Length
- 782 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Ribosome biogenesis protein NSA1
- UniProt
- P53136
- Pockets
- 4 · best druggability 0.83
Structure
x-ray diffraction · 2 distinct chains · 4% helix, 48% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ribosome biogenesis protein NSA1 | protein | 391 | 4% helix, 48% strand | P53136 |
| B | Ribosome biogenesis protein NSA1 | protein | 391 | 4% helix, 48% strand | P53136 |
Pockets
4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 967 | 0.83 | 0.84 | 103 | empty |
| 2 | 785 | 0.79 | 0.83 | 70 | empty |
| 3 | 65 | 0.35 | 0.77 | 13 | empty |
| 4 | 51 | 0.29 | 0.75 | 15 | empty |
Interfaces
1 interface between chains.
- A–B · 620 Ų buried · 10 hydrogen bonds · protein-protein
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P53136
- Elsewhere: RCSB PDB 5SUM · PDBe 5SUM · UniProt P53136
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