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Crystal structure of swapped human nck SH3.1 domain, 1.3A, orthorhombic form III

Analyse Crystal structure of swapped human nck SH3.1 domain, 1.3A, orthorhombic form III in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
5QU7
Type
protein
Length
114 residues
Chains
2
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Cytoplasmic protein NCK1
UniProt
P16333

Structure

x-ray diffraction · 1 distinct chain · 5% helix, 46% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
A, BCytoplasmic protein NCK1protein575% helix, 46% strandP16333

Interfaces

1 interface between chains.

  • A–B · 2208 Ų buried · 26 hydrogen bonds · protein-protein

Compared structures

  • 5QU7 · Crystal Structure of swapped human Nck SH3.1 domain, 1.3A, orthorhombic form III · the same entry in another collection · chain A against A, TM-score 1.00
  • P16333 · AlphaFold monomer V2.0 prediction for cytoplasmic protein NCK1 (P16333) · a predicted model of the same protein · chain A against A, TM-score 0.57

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