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Crystal structure of the functional domain of the major grass pollen allergen phl P 5B

Analyse Crystal structure of the functional domain of the major grass pollen allergen… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
1L3P
Type
protein
Length
102 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Pollen allergen phl P 5B
UniProt
Q40963
Ligands
MG, PO4

Structure

x-ray diffraction · 1 distinct chain · 78% helix, 0% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
APollen allergen phl P 5Bprotein10278% helix, 0% strandQ40963

Ligands and binding sites

  • MG · Magnesium ion · metal · chains A
  • PO4 · Phosphate ion · ion · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 1L3P · CRYSTAL STRUCTURE OF THE FUNCTIONAL DOMAIN OF THE MAJOR GRASS POLLEN ALLERGEN Phl p 5b · the same entry in another collection · chain A against A, TM-score 1.00
  • Q40963 · AlphaFold monomer V2.0 prediction for pollen allergen phl P 5B (Q40963) · a predicted model of the same protein · chain A against A, TM-score 0.70

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