MolNFT v1 · #241931 · protein
AlphaFold monomer V2.0 prediction for pollen allergen phl P 5B (Q40963)
Q40963: “AlphaFold monomer V2.0 prediction for pollen allergen phl P 5B (Q40963)”. 3 pockets (best druggability 0.40). MolNFT v1 #241931 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- Accession
- Q40963
- Type
- protein
- Length
- 284 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x6d550761034d809D2162B175722cf896575846D6
- Molecule
- Pollen allergen phl P 5B
- UniProt
- Q40963
- Pockets
- 3 · best druggability 0.40
Structure
1 distinct chain · 60% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Pollen allergen phl P 5B | protein | 284 | 60% helix, 0% strand | Q40963 |
Pockets
3 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 58 | 0.40 | 0.81 | 19 | empty |
| 2 | 50 | 0.35 | 0.80 | 16 | empty |
| 3 | 65 | 0.30 | 0.74 | 14 | empty |
Compared structures
- 1L3P · CRYSTAL STRUCTURE OF THE FUNCTIONAL DOMAIN OF THE MAJOR GRASS POLLEN ALLERGEN Phl p 5b · an experimental structure of the same protein · chain A against A, TM-score 0.29
- 1L3P · Crystal structure of the functional domain of the major grass pollen allergen phl P 5B · an experimental structure of the same protein · chain A against A, TM-score 0.29
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q40963
- Elsewhere: UniProt Q40963 · AlphaFold DB Q40963
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