Research workbench

Solution structure of the ppiase domain from E. COLI trigger factor

Analyse Solution structure of the ppiase domain from E. COLI trigger factor in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 1L1P
Type: protein
Length: 106 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Trigger factor
EC: 5.2.1.8
UniProt: P0A850
Pockets: 1 · best druggability 0.32

Structure

solution nmr · 1 distinct chain · 4% helix, 31% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Trigger factor (EC 5.2.1.8)	protein	106	4% helix, 31% strand	P0A850

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	62	0.32	0.76	21	empty

Compared structures

1L1P · Solution Structure of the PPIase Domain from E. coli Trigger Factor · the same entry in another collection · chain A against A, TM-score 1.00
P0A850 · AlphaFold monomer V2.0 prediction for trigger factor (P0A850) · a predicted model of the same protein · chain A against A, TM-score 0.62

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P0A850
Elsewhere: RCSB PDB 1L1P · PDBe 1L1P · UniProt P0A850

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.