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Crystal structure of ALPHA1-antichymotrypsin variant dbs-I-ALLO1: an allosterically triggered drug-binding serpin for doxycycline

Analyse Crystal structure of ALPHA1-antichymotrypsin variant dbs-I-ALLO1: an… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
5OM5
Type
protein
Length
372 residues
Chains
2
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
P01011
Ligands
CL

Structure

x-ray diffraction · 2 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein338—P01011
B—protein34—P01011

Ligands and binding sites

  • CL · Chloride ion · ion · chains A, B
  • EDO · 1,2-ethanediol · additive · 3 copies · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 5OM5 · Crystal structure of Alpha1-antichymotrypsin variant DBS-I-allo1: an allosterically… · the same entry in another collection · chain A against A, TM-score 1.00
  • P01011 · AlphaFold monomer V2.0 prediction for alpha-1-antichymotrypsin (P01011) · a predicted model of the same protein · chain A against A, TM-score 0.92

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