Research workbench
Structure of SARS coronavirus main protease in complex with the alpha- ketoamide (S)-N-benzyl-3-((S)-2-cinnamamido-3- cyclopropylpropanamido)-2-oxo-4-((S)-2-oxopyrrolidin-3-YL)BUTANAMIDE (cinnamoyl-cyclopropylalanine-glnlactam-co-co-nh-benzyl)
Analyse Structure of SARS coronavirus main protease in complex with the alpha… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 5N5O
- Type
- protein
- Length
- 306 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P0C6X7
- Ligands
- 8O5
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 306 | — | P0C6X7 |
Ligands and binding sites
- 8O5 · (2~{R},3~{S})-3-[[(2~{S})-3-cyclopropyl-2-[[(~{E})-3-phenylprop-2-enoyl]amino]propanoyl]amino]-2-oxidanyl-4-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]-~{N}-(phenylmethyl)butanamide · ligand · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5N5O · Structure of SARS coronavirus main protease in complex with the alpha-ketoamide… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0C6X7
- Elsewhere: RCSB PDB 5N5O · PDBe 5N5O · UniProt P0C6X7
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