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N-terminal motif dimerization of EGFR transmembrane domain in bicellar environment

Analyse N-terminal motif dimerization of EGFR transmembrane domain in bicellar… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
5LV6
Type
protein
Length
88 residues
Chains
2
Method
solution nmr
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Epidermal growth factor receptor
EC
2.7.10.1
UniProt
P00533

Structure

solution nmr · 1 distinct chain · 52% helix, 0% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
A, BEpidermal growth factor receptor (EC 2.7.10.1)protein4452% helix, 0% strandP00533

Interfaces

1 interface between chains.

  • A–B · 495 Ų buried · 1 hydrogen bond · protein-protein

Compared structures

  • 5LV6 · N-terminal motif dimerization of EGFR transmembrane domain in bicellar environment · the same entry in another collection · chain A against A, TM-score 1.00
  • P00533 · AlphaFold monomer V2.0 prediction for epidermal growth factor receptor (P00533) · a predicted model of the same protein · chain B against A, TM-score 0.52

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