Research workbench
TRNA guanine transglycosylase (tgt) in co-crystallized complex (space group P21) with 6-amino-2-(methylamino)-4-(2-((2R,3R,4S,5R,6S)-3,4,5, 6-tetramethoxytetrahydro-2H-pyran-2-YL)ETHYL)-1H-IMIDAZO[4,5- G]QUINAZOLIN-8(7H)-one
Analyse TRNA guanine transglycosylase (tgt) in co-crystallized complex (space group… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 5LPT
- Type
- protein
- Length
- 731 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P28720
- Ligands
- 726, ZN
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 364 | — | P28720 |
| B | — | protein | 367 | — | P28720 |
Ligands and binding sites
- 726 · 6-azanyl-2-(methylamino)-4-[2-[(2~{R},3~{R},4~{S}, 5~{R},6~{S})-3,4,5,6-tetramethoxyoxan-2-yl]ethyl]-1,7-dihydroimidazo[4,5-g]quinazolin-8-one · ligand · 2 copies · chains A, B
- ZN · Zinc ion · metal · 2 copies · chains A, B
- GOL · Glycerol · additive · 3 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5LPT · tRNA guanine Transglycosylase (TGT) in co-crystallized complex (space group P21) with… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P28720
- Elsewhere: RCSB PDB 5LPT · PDBe 5LPT · UniProt P28720
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