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Crystal structure of apo-form lmw-ptp

Analyse Crystal structure of apo-form lmw-ptp in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 5KQP
Type: protein
Length: 154 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Low molecular weight phosphotyrosine protein phosphatase
EC: 3.1.3.48, 3.1.3.2
UniProt: P24666
Pockets: 1 · best druggability 0.35

Structure

x-ray diffraction · 1 distinct chain · 44% helix, 15% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Low molecular weight phosphotyrosine protein phosphatase (EC 3.1.3.48, 3.1.3.2)	protein	154	44% helix, 15% strand	P24666

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	50	0.35	0.79	12	empty

Compared structures

5KQP · Crystal structure of Apo-form LMW-PTP · the same entry in another collection · chain A against A, TM-score 1.00
P24666 · AlphaFold monomer V2.0 prediction for low molecular weight phosphotyrosine protein… · a predicted model of the same protein · chain A against A, TM-score 0.99

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P24666
Elsewhere: RCSB PDB 5KQP · PDBe 5KQP · UniProt P24666

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