Research workbench

ASCPF1(E993A)-crrna-DNA ternary complex

Analyse ASCPF1(E993A)-crrna-DNA ternary complex in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 5KK5
Type: protein + DNA + RNA
Length: 1,276 residues
Chains: 4
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: U2UMQ6

Structure

x-ray diffraction · 4 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	—	protein	1201	—	U2UMQ6
B	—	rna	39	—	—
C	—	dna	28	—	—
D	—	dna	8	—	—

Compared structures

5KK5 · AsCpf1(E993A)-crRNA-DNA ternary complex · the same entry in another collection · chain A against A, TM-score 1.00
U2UMQ6 · AlphaFold monomer V2.0 prediction for CRISPR-associated endonuclease CAS12A (U2UMQ6) · a predicted model of the same protein · chain A against A, TM-score 0.98

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt U2UMQ6
Elsewhere: RCSB PDB 5KK5 · PDBe 5KK5 · UniProt U2UMQ6

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.