Research workbench
Trypanosome brucei hypoxanthine-guanine phosphoribosyltranferase in complex with a 9-(4-(PHOSPHONOBUTIL)HYPOXANTHINE
Analyse Trypanosome brucei hypoxanthine-guanine phosphoribosyltranferase in complex… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 5KAP
- Type
- protein
- Length
- 329 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q07010
- Ligands
- 6RH, MG, SO4
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 159 | — | Q07010 |
| B | — | protein | 170 | — | Q07010 |
Ligands and binding sites
- 6RH · 4-(6-oxidanylidene-1~{H}-purin-9-yl)butylphosphonic acid · ligand · 2 copies · chains A, B
- MG · Magnesium ion · metal · 6 copies · chains A, B
- SO4 · Sulfate ion · ion · 3 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5KAP · Trypanosome brucei Hypoxanthine-guanine phosphoribosyltranferase in complex with a… · the same entry in another collection · chain A against A, TM-score 1.00
- Q07010 · AlphaFold monomer V2.0 prediction for hypoxanthine-guanine phosphoribosyltransferase… · a predicted model of the same protein · chain B against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q07010
- Elsewhere: RCSB PDB 5KAP · PDBe 5KAP · UniProt Q07010
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