Research workbench
Domain 4 segment 6 of voltage-gated sodium channel NAV1.4
Analyse Domain 4 segment 6 of voltage-gated sodium channel NAV1.4 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 5JR0
- Type
- protein
- Length
- 34 residues
- Chains
- 1
- Method
- solid-state nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Sodium channel protein type 4 subunit alpha
- UniProt
- P15390
- Ligands
- NH2
Structure
solid-state nmr · 1 distinct chain · 82% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Sodium channel protein type 4 subunit alpha | protein | 34 | 82% helix, 0% strand | P15390 |
Ligands and binding sites
- NH2 · Amino group · ion · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5JR0 · Domain 4 Segment 6 of voltage-gated sodium channel Nav1.4 · the same entry in another collection · chain A against A, TM-score 1.00
- P15390 · AlphaFold monomer V2.0 prediction for sodium channel protein type 4 subunit alpha (P15390) · a predicted model of the same protein · chain A against A, TM-score 0.74
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P15390
- Elsewhere: RCSB PDB 5JR0 · PDBe 5JR0 · UniProt P15390
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