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Crystal structure of human NAA60 in complex with CoA

Analyse Crystal structure of human NAA60 in complex with CoA in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
5HH0
Type
protein
Length
195 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
N-alpha-acetyltransferase 60
EC
2.3.1.48, 2.3.1.88
UniProt
Q9H7X0
Ligands
COA
Pockets
1 · best druggability 0.72

Structure

x-ray diffraction · 1 distinct chain · 37% helix, 32% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
AN-alpha-acetyltransferase 60 (EC 2.3.1.48, 2.3.1.88)protein19537% helix, 32% strandQ9H7X0

Ligands and binding sites

  • COA · Coenzyme A · ligand · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
15860.720.8051COA

Compared structures

  • 5HH0 · Crystal structure of human Naa60 in complex with CoA · the same entry in another collection · chain A against A, TM-score 1.00
  • Q9H7X0 · AlphaFold monomer V2.0 prediction for N-alpha-acetyltransferase 60 (Q9H7X0) · a predicted model of the same protein · chain A against A, TM-score 0.94

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