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Crystal structure of nagz H174A mutant from pseudomonas aeruginosa
Analyse Crystal structure of nagz H174A mutant from pseudomonas aeruginosa in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 5G5U
- Type
- protein
- Length
- 666 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Beta-hexosaminidase
- EC
- 3.2.1.52
- UniProt
- Q9HZK0
- Pockets
- 5 · best druggability 0.79
Structure
x-ray diffraction · 1 distinct chain · 42% helix, 13% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Beta-hexosaminidase (EC 3.2.1.52) | protein | 333 | 42% helix, 13% strand | Q9HZK0 |
Pockets
5 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1140 | 0.79 | 0.80 | 111 | empty |
| 2 | 158 | 0.46 | 0.76 | 20 | empty |
| 3 | 85 | 0.43 | 0.79 | 18 | empty |
| 4 | 91 | 0.36 | 0.75 | 17 | empty |
| 5 | 83 | 0.36 | 0.76 | 15 | empty |
Interfaces
1 interface between chains.
- A–B · 390 Ų buried · 7 hydrogen bonds · protein-protein
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9HZK0
- Elsewhere: RCSB PDB 5G5U · PDBe 5G5U · UniProt Q9HZK0
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