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Fucose binding lectin

Analyse Fucose binding lectin in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 1K12
Type: protein
Length: 158 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Lectin
UniProt: Q7SIC1
Ligands: FUC, CA, CL

Structure

x-ray diffraction · 1 distinct chain · 9% helix, 43% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Lectin	protein	158	9% helix, 43% strand	Q7SIC1

Ligands and binding sites

FUC · alpha-L-fucopyranose · sugar · chains A
CA · Calcium ion · metal · chains A
CL · Chloride ion · ion · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Modifications

Observed in the structure: 3 disulfide (disulfide).

Compared structures

1K12 · Fucose Binding lectin · the same entry in another collection · chain A against A, TM-score 1.00
Q7SIC1 · AlphaFold monomer V2.0 prediction for fucolectin (Q7SIC1) · a predicted model of the same protein · chain A against A, TM-score 0.99

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q7SIC1
Elsewhere: RCSB PDB 1K12 · PDBe 1K12 · UniProt Q7SIC1

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