Research workbench
Stoffel fragment of taq DNA polymerase I
Analyse Stoffel fragment of taq DNA polymerase I in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1JXE
- Type
- protein
- Length
- 525 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Taq DNA polymerase I
- EC
- 2.7.7.7
- UniProt
- P19821
- Pockets
- 5 · best druggability 0.64
Structure
x-ray diffraction · 1 distinct chain · 55% helix, 13% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Taq DNA polymerase I (EC 2.7.7.7) | protein | 525 | 55% helix, 13% strand | P19821 |
Pockets
5 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 253 | 0.64 | 0.82 | 35 | empty |
| 2 | 106 | 0.50 | 0.81 | 17 | empty |
| 3 | 184 | 0.48 | 0.75 | 26 | empty |
| 4 | 65 | 0.38 | 0.79 | 14 | empty |
| 5 | 61 | 0.28 | 0.73 | 13 | empty |
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P19821
- Elsewhere: RCSB PDB 1JXE · PDBe 1JXE · UniProt P19821
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.