Research workbench
NMR solution structure of an ef-hand calcium binding protein (EHCABP6) from entamoeba histolytica
Analyse NMR solution structure of an ef-hand calcium binding protein (EHCABP6) from… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 5B7X
- Type
- protein
- Length
- 156 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Calmodulin, putative
- UniProt
- M7WXJ8
- Ligands
- CA
- Pockets
- 2 · best druggability 0.55
Structure
solution nmr · 1 distinct chain · 53% helix, 1% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Calmodulin, putative | protein | 156 | 53% helix, 1% strand | M7WXJ8 |
Ligands and binding sites
- CA · Calcium ion · metal · 2 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 155 | 0.55 | 0.81 | 33 | empty |
| 2 | 57 | 0.41 | 0.81 | 15 | empty |
Compared structures
- 5B7X · NMR Solution structure of an EF-hand Calcium binding protein (EhCaBP6) from Entamoeba… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt M7WXJ8
- Elsewhere: RCSB PDB 5B7X · PDBe 5B7X · UniProt M7WXJ8
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