Research workbench
Crystal structure of SLTB3 from pseudomonas aeruginosa.
Analyse Crystal structure of SLTB3 from pseudomonas aeruginosa. in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 5ANZ
- Type
- protein
- Length
- 375 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Soluble lytic transglycosylase B3
- UniProt
- Q9HX28
- Ligands
- CA
- Pockets
- 4 · best druggability 0.67
Structure
x-ray diffraction · 1 distinct chain · 50% helix, 6% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Soluble lytic transglycosylase B3 | protein | 375 | 50% helix, 6% strand | Q9HX28 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 434 | 0.67 | 0.79 | 34 | PEG |
| 2 | 109 | 0.49 | 0.80 | 16 | empty |
| 3 | 80 | 0.38 | 0.78 | 16 | empty |
| 4 | 65 | 0.30 | 0.74 | 22 | empty |
Compared structures
- 5ANZ · Crystal Structure of SltB3 from Pseudomonas aeruginosa. · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9HX28
- Elsewhere: RCSB PDB 5ANZ · PDBe 5ANZ · UniProt Q9HX28
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