Research workbench
Cryo electron tomography of the NAIP5-NLRC4 inflammasome
Analyse Cryo electron tomography of the NAIP5-NLRC4 inflammasome in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 5AJ2
- Type
- protein
- Length
- 904 residues
- Chains
- 3
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Nlr family card domain-containing protein 4
- UniProt
- Q3UP24
Structure
electron microscopy · 3 distinct chains · 0% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Nlr family card domain-containing protein 4 | protein | 263 | 0% helix, 0% strand | Q3UP24 |
| B | Nlr family card domain-containing protein 4 | protein | 225 | 0% helix, 0% strand | Q3UP24 |
| C | Nlr family card domain-containing protein 4 | protein | 416 | 0% helix, 0% strand | Q3UP24 |
Interfaces
2 interfaces between chains.
- B–C · 363 Ų buried · 0 hydrogen bonds · protein-protein
- A–B · 158 Ų buried · 0 hydrogen bonds · protein-protein
Compared structures
- 5AJ2 · Cryo electron tomography of the Naip5-Nlrc4 inflammasome · the same entry in another collection · chain A against A, TM-score 1.00
- Q3UP24 · AlphaFold monomer V2.0 prediction for nlr family card domain- containing protein 4… · a predicted model of the same protein · chain A against A, TM-score 0.98
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q3UP24
- Elsewhere: RCSB PDB 5AJ2 · PDBe 5AJ2 · UniProt Q3UP24
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