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Solution structure of the tam domain of human TIP5 BAZ2A involved in epigenetic regulation of rRNA genes

Analyse Solution structure of the tam domain of human TIP5 BAZ2A involved in epigenetic… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 5AGQ
Type: protein
Length: 109 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Bromodomain adjacent to zinc finger domain protein 2A
UniProt: Q9UIF9
Pockets: 1 · best druggability 0.34

Structure

solution nmr · 1 distinct chain · 28% helix, 30% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Bromodomain adjacent to zinc finger domain protein 2A	protein	109	28% helix, 30% strand	Q9UIF9

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	71	0.34	0.76	14	empty

Compared structures

5AGQ · Solution structure of the TAM domain of human TIP5 BAZ2A involved in epigenetic… · the same entry in another collection · chain A against A, TM-score 1.00
Q9UIF9 · AlphaFold monomer V2.0 prediction for bromodomain adjacent to zinc finger domain protein… · a predicted model of the same protein · chain A against A, TM-score 0.92

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9UIF9
Elsewhere: RCSB PDB 5AGQ · PDBe 5AGQ · UniProt Q9UIF9

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