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The crystal structure of arabidopsis thaliana CAR1 in complex with one calcium ion

Analyse The crystal structure of arabidopsis thaliana CAR1 in complex with one calcium… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 5A52
Type: protein
Length: 154 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Calcium-dependent lipid-binding domain-containing protein
UniProt: Q9FHP6
Ligands: CA, SO4
Pockets: 1 · best druggability 0.35

Structure

x-ray diffraction · 1 distinct chain · 8% helix, 45% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Calcium-dependent lipid-binding domain-containing protein	protein	154	8% helix, 45% strand	Q9FHP6

Ligands and binding sites

CA · Calcium ion · metal · chains A
SO4 · Sulfate ion · ion · 2 copies · chains A
GOL · Glycerol · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	52	0.35	0.79	13	empty

Compared structures

5A52 · The crystal structure of Arabidopsis thaliana CAR1 in complex with one calcium ion · the same entry in another collection · chain A against A, TM-score 1.00
Q9FHP6 · AlphaFold monomer V2.0 prediction for protein C2-domain aba-related 1 (Q9FHP6) · a predicted model of the same protein · chain A against A, TM-score 0.98

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9FHP6
Elsewhere: RCSB PDB 5A52 · PDBe 5A52 · UniProt Q9FHP6

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