Research workbench
Crystal structure of protocadherin gamma A8 EC1-3
Analyse Crystal structure of protocadherin gamma A8 EC1-3 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 4ZPS
- Type
- protein
- Length
- 313 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- MCG133388, isoform CRA_M
- UniProt
- Q91XY0
- Ligands
- MAN, CA
Structure
x-ray diffraction · 1 distinct chain · 8% helix, 44% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | MCG133388, isoform CRA_M | protein | 313 | 8% helix, 44% strand | Q91XY0 |
Ligands and binding sites
- MAN · alpha-D-mannopyranose · sugar · 2 copies · chains A
- CA · Calcium ion · metal · 7 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Modifications
Observed in the structure: 2 glycan, 1 disulfide (O-glycosylation, disulfide).
Compared structures
- 4ZPS · Crystal Structure of Protocadherin Gamma A8 EC1-3 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q91XY0
- Elsewhere: RCSB PDB 4ZPS · PDBe 4ZPS · UniProt Q91XY0
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