Research workbench
Crystal structure of the uba domain of DSK2 in complex with ubiquitin
Analyse Crystal structure of the uba domain of DSK2 in complex with ubiquitin in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 4UN2
- Type
- protein
- Length
- 115 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Ubiquitin; Ubiquitin domain-containing protein DSK2
- UniProt
- P0CG48, P48510
Structure
x-ray diffraction · 2 distinct chains · 43% helix, 23% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ubiquitin | protein | 72 | 25% helix, 36% strand | P0CG48 |
| B | Ubiquitin domain-containing protein DSK2 | protein | 43 | 74% helix, 0% strand | P48510 |
Interfaces
1 interface between chains.
- A–B · 475 Ų buried · 6 hydrogen bonds · protein-protein
Compared structures
- 4UN2 · Crystal structure of the UBA domain of Dsk2 in complex with Ubiquitin · the same entry in another collection · chain A against A, TM-score 1.00
- P48510 · AlphaFold monomer V2.0 prediction for ubiquitin domain-containing protein DSK2 (P48510) · a predicted model of the same protein · chain B against A, TM-score 0.92
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0CG48
- Every structure of UniProt P48510
- Elsewhere: RCSB PDB 4UN2 · PDBe 4UN2 · UniProt P0CG48 · UniProt P48510
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