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The crystal structure of the complex of LIP5 ntd and IST1 mim

Analyse The crystal structure of the complex of LIP5 ntd and IST1 mim in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 4U7E
Type: protein
Length: 177 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Vacuolar protein sorting-associated protein VTA1 homolog; IST1 homolog
UniProt: Q9NP79, P53990

Structure

x-ray diffraction · 2 distinct chains · 77% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
B	Vacuolar protein sorting-associated protein VTA1 homolog	protein	163	78% helix, 0% strand	Q9NP79
A	IST1 homolog	protein	14	64% helix, 0% strand	P53990

Interfaces

1 interface between chains.

B–A · 570 Å² buried · 6 hydrogen bonds · protein-protein

Compared structures

4U7E · The crystal structure of the complex of LIP5 NTD and IST1 MIM · the same entry in another collection · chain B against B, TM-score 1.00
Q9NP79 · AlphaFold monomer V2.0 prediction for vacuolar protein sorting- associated protein VTA1… · a predicted model of the same protein · chain B against A, TM-score 0.98
P53990 · AlphaFold monomer V2.0 prediction for IST1 homolog (P53990) · a predicted model of the same protein · chain A against A, TM-score 0.71

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9NP79
Every structure of UniProt P53990
Elsewhere: RCSB PDB 4U7E · PDBe 4U7E · UniProt Q9NP79 · UniProt P53990

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