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Crystal structure of ribose transporter solute binding protein RHE_PF00037 from rhizobium etli cfn 42, target efi-511357, in complex with D-ribose

Analyse Crystal structure of ribose transporter solute binding protein RHE_PF00037 from… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 4RY0
Type: protein
Length: 287 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Probable ribose ABC transporter, substrate-binding protein
UniProt: Q2JZQ5
Ligands: RIP, CA, CL

Structure

x-ray diffraction · 1 distinct chain · 44% helix, 22% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Probable ribose ABC transporter, substrate-binding protein	protein	287	44% helix, 22% strand	Q2JZQ5

Ligands and binding sites

RIP · beta-D-ribopyranose · ligand · chains A
CA · Calcium ion · metal · chains A
CL · Chloride ion · ion · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

4RY0 · Crystal structure of ribose transporter solute binding protein RHE_PF00037 from Rhizobium… · the same entry in another collection · chain A against A, TM-score 1.00
Q2JZQ5 · AlphaFold monomer V2.0 prediction for D-apiose import binding protein (Q2JZQ5) · a predicted model of the same protein · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q2JZQ5
Elsewhere: RCSB PDB 4RY0 · PDBe 4RY0 · UniProt Q2JZQ5

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