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Interleukin-1 beta from joint X-ray and NMR refinement

Analyse Interleukin-1 beta from joint X-ray and NMR refinement in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 1IOB
Type: protein
Length: 153 residues
Chains: 1
Method: x-ray diffraction; solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Interleukin-1 beta
UniProt: P01584
Pockets: 1 · best druggability 0.28

Structure

x-ray diffraction; solution nmr · 1 distinct chain · 6% helix, 46% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Interleukin-1 beta	protein	153	6% helix, 46% strand	P01584

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	56	0.28	0.74	15	empty

Compared structures

1IOB · Interleukin-1 beta from joint X-ray and NMR refinement · the same entry in another collection · chain A against A, TM-score 1.00
P01584 · AlphaFold monomer V2.0 prediction for interleukin-1 beta (P01584) · a predicted model of the same protein · chain A against A, TM-score 0.98

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P01584
Elsewhere: RCSB PDB 1IOB · PDBe 1IOB · UniProt P01584

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