Research workbench
Crystal structure of the C-terminal domain of P100/NF-KB2
Analyse Crystal structure of the C-terminal domain of P100/NF-KB2 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 4OT9
- Type
- protein
- Length
- 298 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Nuclear factor nf-kappa-B P100 subunit
- UniProt
- Q00653
- Ligands
- SO4
Structure
x-ray diffraction · 1 distinct chain · 51% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Nuclear factor nf-kappa-B P100 subunit | protein | 298 | 51% helix, 0% strand | Q00653 |
Ligands and binding sites
- SO4 · Sulfate ion · ion · 2 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 4OT9 · crystal structure of the C-terminal domain of p100/NF-kB2 · the same entry in another collection · chain A against A, TM-score 1.00
- Q00653 · AlphaFold monomer V2.0 prediction for nuclear factor nf-kappa-B P100 subunit (Q00653) · a predicted model of the same protein · chain A against A, TM-score 0.95
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q00653
- Elsewhere: RCSB PDB 4OT9 · PDBe 4OT9 · UniProt Q00653
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