Research workbench
Structural re-examination of native bla G 4
Analyse Structural re-examination of native bla G 4 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 4N7C
- Type
- protein
- Length
- 174 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Bla G 4 allergen variant 1
- UniProt
- B7TYB2
- Ligands
- AEF
- Pockets
- 1 · best druggability 0.77
Structure
x-ray diffraction · 1 distinct chain · 24% helix, 36% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Bla G 4 allergen variant 1 | protein | 174 | 24% helix, 36% strand | B7TYB2 |
Ligands and binding sites
- AEF · 4-(2-aminoethyl)phenol · ligand · chains A
- GOL · Glycerol · additive · 2 copies · chains A
- CIT · Citric acid · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 78 | 0.77 | 0.99 | 18 | AEF |
Modifications
Observed in the structure: 2 disulfide (disulfide).
Compared structures
- 4N7C · Structural re-examination of native Bla g 4 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B7TYB2
- Elsewhere: RCSB PDB 4N7C · PDBe 4N7C · UniProt B7TYB2
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