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F17a-G lectin domain with bound GlcNAc(beta1-3)Gal

Analyse F17a-G lectin domain with bound GlcNAc(beta1-3)Gal in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 3F6J
Type: protein
Length: 167 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v2 / PDB Bank
Contract: 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
Owner: 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
Resolution: 1.75
Source: Escherichia coli
Molecule: F17a-G
UniProt: Q99003
Ligands: MBG, NAG

Structure

x-ray diffraction · resolution 1.75 · 1 distinct chain · 2% helix, 59% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	F17a-G	protein	167	2% helix, 59% strand	Q99003

Ligands and binding sites

MBG · methyl beta-D-galactopyranoside · sugar · chains A
NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Modifications

Observed in the structure: 1 disulfide (disulfide).

Compared structures

3F6J · F17A-G lectin domain with bound GLCNAC(BETA1-3)GAL · the same entry in another collection · chain A against A, TM-score 1.00
Q99003 · AlphaFold monomer V2.0 prediction for F17A-G fimbrial adhesin (Q99003) · a predicted model of the same protein · chain A against A, TM-score 0.97

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q99003
Elsewhere: RCSB PDB 3F6J · PDBe 3F6J · UniProt Q99003

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