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2.75 angstrom structure of the D347G D348G mutant structure of Sapporo Virus RdRp Polymerase
Analyse 2.75 angstrom structure of the D347G D348G mutant structure of Sapporo Virus… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 2UUW
- Type
- protein
- Length
- 490 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 2.76
- Source
- SAPPORO VIRUS
- Molecule
- RNA-directed RNA polymerase
- EC
- 2.7.7.48
- UniProt
- Q69014
- Pockets
- 4 · best druggability 0.62
Structure
x-ray diffraction · resolution 2.76 · 1 distinct chain · 43% helix, 17% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | RNA-directed RNA polymerase (EC 2.7.7.48) | protein | 490 | 43% helix, 17% strand | Q69014 |
Pockets
4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 450 | 0.62 | 0.76 | 37 | empty |
| 2 | 361 | 0.56 | 0.75 | 55 | empty |
| 3 | 108 | 0.43 | 0.78 | 22 | empty |
| 4 | 104 | 0.34 | 0.73 | 14 | empty |
Compared structures
- 2UUW · 2.75 ångström structure of the D347G D348G mutant structure of sapporo virus rdrp… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q69014
- Elsewhere: RCSB PDB 2UUW · PDBe 2UUW · UniProt Q69014
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