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Solution structure of 50S ribosomal protein L28 from Thermotoga maritima. Northeast Structural Genomics Consortium target VR97

Analyse Solution structure of 50S ribosomal protein L28 from Thermotoga maritima.… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 2JZ6
Type: protein
Length: 77 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v2 / PDB Bank
Contract: 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
Owner: 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
Resolution: NOT
Source: Thermotoga maritima MSB8
Molecule: 50S ribosomal protein L28
UniProt: Q9WY96
Pockets: 1 · best druggability 0.56

Structure

solution nmr · resolution NOT · 1 distinct chain · 8% helix, 22% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	50S ribosomal protein L28	protein	77	8% helix, 22% strand	Q9WY96

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	283	0.56	0.77	34	empty

Compared structures

2JZ6 · Solution structure of 50S ribosomal protein L28 from thermotoga maritima. northeast… · the same entry in another collection · chain A against A, TM-score 1.00
Q9WY96 · AlphaFold monomer V2.0 prediction for 50S ribosomal protein L28 (Q9WY96) · a predicted model of the same protein · chain A against A, TM-score 0.48

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Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9WY96
Elsewhere: RCSB PDB 2JZ6 · PDBe 2JZ6 · UniProt Q9WY96

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