MolNFT v1 · #41812 · protein

Solution structure of 50S ribosomal protein L28 from thermotoga maritima. northeast structural genomics consortium target VR97

2JZ6: “Solution structure of 50S ribosomal protein L28 from thermotoga maritima. northeast structural genomics…”. Solution nmr, 1 pocket (best druggability 0.56). MolNFT v1 #41812 on GenesisL1: 3D structure, binding sites and pockets in…

PDB: 2JZ6
Type: protein
Length: 77 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: 50S ribosomal protein L28
UniProt: Q9WY96
Pockets: 1 · best druggability 0.56

Structure

solution nmr · 1 distinct chain · 8% helix, 22% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	50S ribosomal protein L28	protein	77	8% helix, 22% strand	Q9WY96

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	283	0.56	0.77	34	empty

Compared structures

2JZ6 · Solution structure of 50S ribosomal protein L28 from Thermotoga maritima. Northeast… · the same entry in another collection · chain A against A, TM-score 1.00
Q9WY96 · AlphaFold monomer V2.0 prediction for 50S ribosomal protein L28 (Q9WY96) · a predicted model of the same protein · chain A against A, TM-score 0.48

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9WY96
Elsewhere: RCSB PDB 2JZ6 · PDBe 2JZ6 · UniProt Q9WY96

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