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Effect of Shuttle Location and pH Environment on H+ Transfer in Human Carbonic Anhydrase II

Analyse Effect of Shuttle Location and pH Environment on H+ Transfer in Human Carbonic… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
1TE3
Type
protein
Length
258 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v2 / PDB Bank
Contract
0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
Owner
0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
Resolution
2
Source
Homo sapiens
Molecule
Carbonic anhydrase II
EC
4.2.1.1
UniProt
P00918
Ligands
ZN, CL
Pockets
1 · best druggability 0.53

Structure

x-ray diffraction · resolution 2 · 1 distinct chain · 16% helix, 30% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
XCarbonic anhydrase II (EC 4.2.1.1)protein25816% helix, 30% strandP00918

Ligands and binding sites

  • ZN · Zinc ion · metal · chains X
  • CL · Chloride ion · ion · chains X

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
11010.530.8324CL

Compared structures

  • 1TE3 · Effect of shuttle location and pH environment on H+ transfer in human carbonic anhydrase… · the same entry in another collection · chain X against X, TM-score 1.00
  • P00918 · AlphaFold monomer V2.0 prediction for carbonic anhydrase 2 (P00918) · a predicted model of the same protein · chain X against A, TM-score 0.99

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