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Porcine trypsin with no inhibitor bound

Analyse Porcine trypsin with no inhibitor bound in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
1S81
Type
protein
Length
223 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v2 / PDB Bank
Contract
0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
Owner
0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
Resolution
1.7
Source
Sus scrofa
Molecule
Trypsin
EC
3.4.21.4
UniProt
P00761
Ligands
CA, NA, SO4

Structure

x-ray diffraction · resolution 1.7 · 1 distinct chain · 10% helix, 35% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
ATrypsin (EC 3.4.21.4)protein22310% helix, 35% strandP00761

Ligands and binding sites

  • CA · Calcium ion · metal · chains A
  • NA · Sodium ion · metal · chains A
  • SO4 · Sulfate ion · ion · chains A
  • EDO · 1,2-ethanediol · additive · 3 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Modifications

Observed in the structure: 6 disulfide (disulfide).

Compared structures

  • 1S81 · Porcine trypsin with no inhibitor bound · the same entry in another collection · chain A against A, TM-score 1.00
  • P00761 · AlphaFold monomer V2.0 prediction for trypsin (P00761) · a predicted model of the same protein · chain A against A, TM-score 1.00

Analyse

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