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Non-myristoylated rat ADP-ribosylation factor-1 complexed with GDP, monomeric crystal form

Analyse Non-myristoylated rat ADP-ribosylation factor-1 complexed with GDP, monomeric… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
1RRF
Type
protein
Length
175 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v2 / PDB Bank
Contract
0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
Owner
0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
Resolution
3
Source
Rattus norvegicus
Molecule
Rat ADP-ribosylation factor-1
UniProt
P84079
Ligands
GDP, MG

Structure

x-ray diffraction · resolution 3 · 1 distinct chain · 26% helix, 28% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
ARat ADP-ribosylation factor-1protein17526% helix, 28% strandP84079

Ligands and binding sites

  • GDP · Guanosine-5'-diphosphate · ligand · chains A
  • MG · Magnesium ion · metal · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 1RRF · Non-myristoylated rat ADP-ribosylation factor-1 complexed with GDP, monomeric crystal form · the same entry in another collection · chain A against A, TM-score 1.00
  • P84079 · AlphaFold monomer V2.0 prediction for ADP-ribosylation factor 1 (P84079) · a predicted model of the same protein · chain A against A, TM-score 0.80

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