Research workbench
Apo-AtPRT6 UBR box
Analyse Apo-AtPRT6 UBR box in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 7XWD
- Type
- protein
- Length
- 70 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 2.396
- Source
- Arabidopsis thaliana
- Molecule
- E3 ubiquitin-protein ligase PRT6
- EC
- 2.3.2.27
- UniProt
- F4KCC2
- Ligands
- ZN
Structure
x-ray diffraction · resolution 2.396 · 1 distinct chain · 16% helix, 21% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | E3 ubiquitin-protein ligase PRT6 (EC 2.3.2.27) | protein | 70 | 16% helix, 21% strand | F4KCC2 |
Ligands and binding sites
- ZN · Zinc ion · metal · 3 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- F4KCC2 · AlphaFold monomer V2.0 prediction for E3 ubiquitin-protein ligase PRT6 (F4KCC2) · a predicted model of the same protein · chain A against A, TM-score 0.95
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt F4KCC2
- Elsewhere: RCSB PDB 7XWD · PDBe 7XWD · UniProt F4KCC2
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.