Research workbench
Crystal structure of the MIZ1-BTB-domain
Analyse Crystal structure of the MIZ1-BTB-domain in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 7AZW
- Type
- protein
- Length
- 233 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 2.1
- Source
- Homo sapiens
- Molecule
- Zinc finger and BTB domain-containing protein 17 isoform X1
- UniProt
- Q13105
- Pockets
- 1 · best druggability 0.37
Structure
x-ray diffraction · resolution 2.1 · 2 distinct chains · 55% helix, 12% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Zinc finger and BTB domain-containing protein 17 isoform X1 | protein | 119 | 51% helix, 12% strand | Q13105 |
| B | Zinc finger and BTB domain-containing protein 17 isoform X1 | protein | 114 | 60% helix, 12% strand | Q13105 |
Ligands and binding sites
- GOL · Glycerol · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 88 | 0.37 | 0.75 | 15 | GOL |
Interfaces
1 interface between chains.
- A–B · 1645 Ų buried · 18 hydrogen bonds · protein-protein
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q13105
- Elsewhere: RCSB PDB 7AZW · PDBe 7AZW · UniProt Q13105
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