Research workbench
MicroED structure of proteinase K from a platinum-coated, polished, single lamella at 1.91A resolution (#10)
Analyse MicroED structure of proteinase K from a platinum-coated, polished, single… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6PKP
- Type
- protein
- Length
- 279 residues
- Chains
- 1
- Method
- electron crystallography
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 1.91
- Source
- Parengyodontium album
- Molecule
- Proteinase K
- EC
- 3.4.21.64
- UniProt
- P06873
- Pockets
- 1 · best druggability 0.35
Structure
electron crystallography · resolution 1.91 · 1 distinct chain · 28% helix, 24% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Proteinase K (EC 3.4.21.64) | protein | 279 | 28% helix, 24% strand | P06873 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 82 | 0.35 | 0.75 | 25 | empty |
Modifications
Observed in the structure: 2 disulfide (disulfide).
Compared structures
- 6PKP · Microed structure of proteinase K from a platinum-coated, polished, single lamella at… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P06873
- Elsewhere: RCSB PDB 6PKP · PDBe 6PKP · UniProt P06873
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