Research workbench
A class C beta-lactamase mutant - Y150F
Analyse A class C beta-lactamase mutant - Y150F in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6M5H
- Type
- protein
- Length
- 361 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 1.2
- Source
- Klebsiella pneumoniae
- Molecule
- Beta-lactamase
- EC
- 3.5.2.6
- UniProt
- Q9XB24
- Pockets
- 2 · best druggability 0.62
Structure
x-ray diffraction · resolution 1.2 · 1 distinct chain · 40% helix, 24% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Beta-lactamase (EC 3.5.2.6) | protein | 361 | 40% helix, 24% strand | Q9XB24 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 340 | 0.62 | 0.78 | 44 | empty |
| 2 | 56 | 0.29 | 0.74 | 13 | empty |
Compared structures
- 6M5H · A class C beta-lactamase mutant - Y150F · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9XB24
- Elsewhere: RCSB PDB 6M5H · PDBe 6M5H · UniProt Q9XB24
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