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Crystal structure of chloroplast resolvase ZmMOC1 with the magic triangle I3C

Analyse Crystal structure of chloroplast resolvase ZmMOC1 with the magic triangle I3C in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
6LCM
Type
protein
Length
166 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v2 / PDB Bank
Contract
0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
Owner
0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
Resolution
2.5
Source
Zea mays
Molecule
ZmMoc1
UniProt
B4FCI7
Ligands
I3C
Pockets
1 · best druggability 0.48

Structure

x-ray diffraction · resolution 2.5 · 1 distinct chain · 41% helix, 23% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
CZmMoc1protein16641% helix, 23% strandB4FCI7

Ligands and binding sites

  • I3C · 5-amino-2,4,6-triiodobenzene-1,3-dicarboxylic acid · ligand · 3 copies · chains C

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
11890.480.7533empty

Compared structures

  • 6LCM · Crystal structure of chloroplast resolvase ZMMOC1 with the magic triangle I3C · the same entry in another collection · chain C against C, TM-score 1.00

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