Research workbench
Structure of the intermembrane space region of PARC6
Analyse Structure of the intermembrane space region of PARC6 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6JZF
- Type
- protein
- Length
- 301 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 2.534
- Source
- Arabidopsis thaliana
- Molecule
- Plastid division protein CDP1, chloroplastic
- UniProt
- Q8VY16
Structure
x-ray diffraction · resolution 2.534 · 2 distinct chains · 34% helix, 41% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Plastid division protein CDP1, chloroplastic | protein | 153 | 33% helix, 42% strand | Q8VY16 |
| B | Plastid division protein CDP1, chloroplastic | protein | 148 | 34% helix, 40% strand | Q8VY16 |
Interfaces
1 interface between chains.
- A–B · 1054 Ų buried · 15 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 2 disulfide (disulfide).
Compared structures
- 6JZF · Structure of the intermembrane space region of PARC6 · the same entry in another collection · chain A against A, TM-score 1.00
- Q8VY16 · AlphaFold monomer V2.0 prediction for plastid division protein CDP1, chloroplastic… · a predicted model of the same protein · chain A against A, TM-score 0.86
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8VY16
- Elsewhere: RCSB PDB 6JZF · PDBe 6JZF · UniProt Q8VY16
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