MolNFT v1 · #154075 · protein
Structure of the intermembrane space region of PARC6
6JZF · Plastid division protein CDP1, chloroplastic: “Structure of the intermembrane space region of PARC6”. X-ray diffraction. MolNFT v1 #154075 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6JZF
- Type
- protein
- Length
- 301 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Plastid division protein CDP1, chloroplastic
- UniProt
- Q8VY16
Structure
x-ray diffraction · 2 distinct chains · 34% helix, 41% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Plastid division protein CDP1, chloroplastic | protein | 153 | 33% helix, 42% strand | Q8VY16 |
| B | Plastid division protein CDP1, chloroplastic | protein | 148 | 34% helix, 40% strand | Q8VY16 |
Interfaces
1 interface between chains.
- A–B · 1054 Ų buried · 15 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 2 disulfide (disulfide).
Compared structures
- 6JZF · Structure of the intermembrane space region of PARC6 · the same entry in another collection · chain A against A, TM-score 1.00
- Q8VY16 · AlphaFold monomer V2.0 prediction for plastid division protein CDP1, chloroplastic… · a predicted model of the same protein · chain A against A, TM-score 0.86
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8VY16
- Elsewhere: RCSB PDB 6JZF · PDBe 6JZF · UniProt Q8VY16
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