Research workbench
Crystal Structure of YAP1 and Dendrin complex
Analyse Crystal Structure of YAP1 and Dendrin complex in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6JK0
- Type
- protein
- Length
- 112 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v2 / PDB Bank
- Contract
- 0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
- Owner
- 0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
- Resolution
- 3.1
- Source
- Mus musculus
- Molecule
- Transcriptional coactivator YAP1,Dendrin
- UniProt
- P46938, Q80TS7
- Ligands
- CA
Structure
x-ray diffraction · resolution 3.1 · 1 distinct chain · 3% helix, 30% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Transcriptional coactivator YAP1,Dendrin | protein | 112 | 3% helix, 30% strand | P46938, Q80TS7 |
Ligands and binding sites
- CA · Calcium ion · metal · 2 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6JK0 · Crystal structure of YAP1 and dendrin complex · the same entry in another collection · chain A against A, TM-score 1.00
- P46938 · AlphaFold monomer V2.0 prediction for transcriptional coactivator YAP1 (P46938) · a predicted model of the same protein · chain A against A, TM-score 0.38
- Q80TS7 · AlphaFold monomer V2.0 prediction for dendrin (Q80TS7) · a predicted model of the same protein · chain A against A, TM-score 0.20
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P46938
- Every structure of UniProt Q80TS7
- Elsewhere: RCSB PDB 6JK0 · PDBe 6JK0 · UniProt P46938 · UniProt Q80TS7
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