GL1X · GenesisL1 explorer

Research workbench

Concanavalin A structure determined with data from the EuXFEL, the first MHz free electron laser

Analyse Concanavalin A structure determined with data from the EuXFEL, the first MHz… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
6GW9
Type
protein
Length
233 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v2 / PDB Bank
Contract
0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
Owner
0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
Resolution
2.1
Source
Canavalia cathartica
Molecule
Concanavalin V
UniProt
C0HJY1
Ligands
MG, CA

Structure

x-ray diffraction · resolution 2.1 · 1 distinct chain · 5% helix, 46% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
AConcanavalin Vprotein2335% helix, 46% strandC0HJY1

Ligands and binding sites

  • MG · Magnesium ion · metal · chains A
  • CA · Calcium ion · metal · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 6GW9 · Concanavalin a structure determined with data from the euxfel, the first mhz free… · the same entry in another collection · chain A against A, TM-score 1.00
  • C0HJY1 · AlphaFold monomer V2.0 prediction for concanavalin V (C0HJY1) · a predicted model of the same protein · chain A against A, TM-score 0.99

Analyse

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.