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Co-translational folding intermediate dictates membrane targeting of the signal recognition particle (SRP)- receptor

Analyse Co-translational folding intermediate dictates membrane targeting of the signal… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
6FPK
Type
protein
Length
53 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v2 / PDB Bank
Contract
0xd58B01f6C18086e5202cdC5D7Ad3E41790360102
Owner
0xF4e1AA6f26B7DA48EeAD9B24a97927303eeA07b8
Resolution
1.95
Source
Escherichia coli (strain K12)
Molecule
Signal recognition particle receptor FtsY
UniProt
P10121

Structure

x-ray diffraction · resolution 1.95 · 1 distinct chain · 96% helix, 0% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
ASignal recognition particle receptor FtsYprotein5396% helix, 0% strandP10121

Ligands and binding sites

  • MPD · (4S)-2-methyl-2,4-pentanediol · additive · 2 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 6FPK · Co-translational folding intermediate dictates membrane targeting of the signal… · the same entry in another collection · chain A against A, TM-score 1.00
  • P10121 · AlphaFold monomer V2.0 prediction for signal recognition particle receptor ftsy (P10121) · a predicted model of the same protein · chain A against A, TM-score 0.52

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